Start backing out all the old settings.configure() calls, which were

indeed masking the new migration stuff.  yamltest now runs migrations
as part of setting up test CAs; still need to decide whether running
migrations in production is something that should be handled
explicitly via rpki-manage or should be bundled into rpki-sql-setup.

Old settings.configure() code still present as a trail of breadcrumbs
to follow when backing out the rest of the tortuous startup sequence
required by the old way of doing things.

svn path=/branches/tk713/; revision=5950

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